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Channel: Harappa Ancestry Project » ChromoPainter
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ChromoPainter/fineStructure South Asians

You have probably heard of ChromoPainter/fineSTRUCTURE by now (Eurogenes, Dienekes, MDLP and Razib). So I decided to run the South Asian samples data which I had earlier done PCA/MClust on through...

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Dense South Asian ChromoPainter

I had run ChromoPainter/fineSTRUCTURE for 715 South Asians using only about 90,000 SNPs. I thought it would be a useful exercise to use more SNPs, so I had to drop the Reich et al dataset. That left me...

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Dodecad South Asian ChromoPainter

Dienekes ran ChromoPainter/fineSTRUCTURE analysis of South Asians along with some West Eurasian populations, something I had neglected to do in my own South Asian run. Using Dienekes' data, I was...

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Eurasian ChromoPainter Analysis

Some months ago, I decided to run a big ChromoPainter analysis of the Eurasian samples I have. I removed from my dataset not only all Sub-Saharan Africans, but also North Africans and anyone else with...

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Eurasian fineStructure Dendrograms

The dendrogram in the last post about Eurasian ChromoPainter/fineStructure analysis is a little hard to make sense of, so here is the same info in a better format. First, the upper portion showing the...

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Eurasian ChromoPainter Chunk Counts

Continuing with the Eurasian ChromoPainter analysis, here is the zip file containing the chunk counts that were donated by an individual in a column to an individual in a row. Please note that this is...

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