ChromoPainter/fineStructure South Asians
You have probably heard of ChromoPainter/fineSTRUCTURE by now (Eurogenes, Dienekes, MDLP and Razib). So I decided to run the South Asian samples data which I had earlier done PCA/MClust on through...
View ArticleDense South Asian ChromoPainter
I had run ChromoPainter/fineSTRUCTURE for 715 South Asians using only about 90,000 SNPs. I thought it would be a useful exercise to use more SNPs, so I had to drop the Reich et al dataset. That left me...
View ArticleDodecad South Asian ChromoPainter
Dienekes ran ChromoPainter/fineSTRUCTURE analysis of South Asians along with some West Eurasian populations, something I had neglected to do in my own South Asian run. Using Dienekes' data, I was...
View ArticleEurasian ChromoPainter Analysis
Some months ago, I decided to run a big ChromoPainter analysis of the Eurasian samples I have. I removed from my dataset not only all Sub-Saharan Africans, but also North Africans and anyone else with...
View ArticleEurasian fineStructure Dendrograms
The dendrogram in the last post about Eurasian ChromoPainter/fineStructure analysis is a little hard to make sense of, so here is the same info in a better format. First, the upper portion showing the...
View ArticleEurasian ChromoPainter Chunk Counts
Continuing with the Eurasian ChromoPainter analysis, here is the zip file containing the chunk counts that were donated by an individual in a column to an individual in a row. Please note that this is...
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